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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
2
WGBS
1
DNase-seq
1
pCHi-C
Assay category
18
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
narrow histone mark
Date released
9
November, 2018
7
December, 2018
5
January, 2019
1
March, 2020
October, 2017
Available data
21
bam
21
fastq
13
bigWig
11
bed narrowPeak
11
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
22
Homo sapiens
Biosample type
22
tissue
Organ
867
pancreas
731
liver
650
connective tissue
478
adipose tissue
474
epithelium
353
heart
339
kidney
210
vasculature
205
blood vessel
159
bone element
155
brain
135
artery
107
limb
83
musculature of body
68
blood
68
bodily fluid
58
eye
35
nerve
29
embryo
22
spleen
20
lung
18
ureter
16
skeleton
16
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
22
AMP
Genome assembly (visualization)
13
GRCh38
11
hg19
Lab
22
AMP-T2D consortium
month_released!
June, 2018
October, 2017
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
WGBS
DNase-seq
pCHi-C
tissue
spleen
18
2
1
1
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