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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
1
DNA methylation
Target of assay
histone
2
histone modification
2
narrow histone mark
Date released
31
February, 2023
19
October, 2019
June, 2019
1
February, 2020
1
July, 2019
Available data
27
bed narrowPeak
5
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
51
tissue
1
primary cell
Organ
791
pancreas
687
liver
596
connective tissue
458
adipose tissue
413
epithelium
263
heart
244
kidney
bone element
158
vasculature
155
blood vessel
119
artery
69
brain
68
blood
68
bodily fluid
52
eye
limb
28
musculature of body
25
embryo
20
lung
19
nerve
19
spleen
16
skeleton
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
52
AMP
Genome assembly (visualization)
28
hg19
Lab
52
AMP-T2D consortium
month_released!
June, 2019
organ_slims!
bone element
limb
target.investigated_as!
histone
BIOSAMPLE
ASSAY
52 results
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ATAC-seq
total RNA-seq
pCHi-C
RRBS
tissue
islet of Langerhans
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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