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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
95
candidate regulatory elements
82
target gene predictions
69
accessible chromatin
54
chromatin state
50
gene expression
32
binding sites
25
histone modifications
22
eQTL
16
variant allelic effects
14
differential activity
2
caQTL
2
pQTL
Date released
138
September, 2022
119
February, 2021
50
November, 2021
June, 2020
18
February, 2024
17
May, 2021
17
September, 2023
12
October, 2022
11
August, 2021
10
January, 2020
March, 2020
10
May, 2020
9
February, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
November, 2019
Available data
331
bed bed3+
60
tsv
56
bigWig
47
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
463
Homo sapiens
Biosample type
272
primary cell
120
tissue
46
in vitro differentiated cells
25
cell line
Organ
918
epithelium
634
kidney
431
connective tissue
407
brain
360
musculature of body
304
lung
277
intestine
264
pancreas
248
vasculature
235
heart
229
limb
206
bodily fluid
204
embryo
196
skin of body
195
blood
188
blood vessel
166
large intestine
141
liver
140
extraembryonic component
115
stomach
103
eye
84
bone element
83
mammary gland
82
small intestine
81
uterus
80
adipose tissue
73
prostate gland
71
adrenal gland
71
placenta
66
artery
63
ureter
61
penis
54
lymph node
47
thymus
45
gonad
42
esophagus
38
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
thyroid gland
21
nerve
21
ovary
21
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
8
urinary bladder
4
trachea
3
nose
1
pericardium
Project
387
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
388
hg19
124
GRCh38
2
hg18
month_released!
June, 2020
March, 2020
BIOSAMPLE
TYPE
463 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
4
2
osteoblast
2
2
3
1
2
3
2
+ See 43 more…
tissue
spleen
15
7
1
6
1
1
1
adipose tissue
7
7
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
omental fat pad
5
2
2
2
2
2
subcutaneous abdominal adipose tissue
5
1
+ See 7 more…
in vitro differentiated cells
adipocyte
4
6
3
6
1
1
1
mesenchymal stem cell
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 6 more…
cell line
GM23248
2
1
1
1
1
HT1080
2
1
1
fibroblast of cardiac tissue
1
2
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 4 more…
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