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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
126
candidate regulatory elements
109
accessible chromatin
92
differential activity
82
target gene predictions
61
chromatin state
45
binding sites
41
variant allelic effects
28
histone modifications
5
eQTL
3
Fine-mapped variants
2
caQTL
Date released
205
February, 2021
175
September, 2022
155
September, 2023
November, 2021
76
February, 2024
38
March, 2023
35
May, 2021
June, 2020
23
August, 2021
20
January, 2021
15
January, 2020
15
May, 2020
15
November, 2022
12
February, 2023
10
February, 2020
10
May, 2024
9
March, 2020
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
433
bed bed3+
329
tsv
98
bigWig
78
txt
58
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
848
Homo sapiens
Biosample type
691
primary cell
92
tissue
42
cell line
23
in vitro differentiated cells
Organ
807
epithelium
634
kidney
445
brain
398
connective tissue
358
musculature of body
296
lung
260
intestine
257
vasculature
255
pancreas
242
heart
238
limb
206
bodily fluid
203
embryo
197
blood vessel
195
blood
186
skin of body
161
large intestine
148
liver
137
extraembryonic component
107
stomach
99
eye
88
adipose tissue
83
bone element
79
small intestine
79
uterus
77
mammary gland
73
prostate gland
72
artery
69
placenta
63
ureter
62
adrenal gland
61
penis
54
lymph node
47
thymus
44
gonad
41
spinal cord
39
esophagus
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
vein
20
lymphatic vessel
20
ovary
20
thyroid gland
18
mouth
18
skeleton
13
bronchus
13
pituitary gland
12
bone marrow
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
664
AMP
155
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
498
hg19
130
GRCh38
month_released!
June, 2020
November, 2021
BIOSAMPLE
TYPE
848 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
differential activity
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
13
2
6
2
1
1
2
4
endothelial cell
9
3
5
1
2
2
1
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
1
1
endothelial cell of umbilical vein
6
1
4
5
2
1
+ See 124 more…
tissue
spinal cord
14
8
7
1
pigmented layer of retina
20
breast epithelium
5
3
2
esophagus squamous epithelium
6
2
2
C1 segment of cervical spinal cord
1
1
3
+ See 15 more…
cell line
EndoC_BH1
8
8
3
1
1
keratinocyte
3
1
colon epithelial cell
1
1
1
choroid plexus epithelial cell
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 4 more…
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