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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
83
accessible chromatin
73
gene expression
69
target gene predictions
63
candidate regulatory elements
45
chromatin state
45
differential activity
21
binding sites
21
eQTL
20
variant allelic effects
14
Fine-mapped variants
12
histone modifications
3
caQTL
2
sQTL
2
variant to gene
Date released
104
September, 2022
67
February, 2021
51
March, 2023
40
February, 2024
36
May, 2021
21
March, 2020
21
November, 2021
20
January, 2021
20
September, 2023
17
May, 2020
15
January, 2020
9
August, 2021
June, 2020
8
October, 2019
7
August, 2018
7
February, 2020
7
January, 2022
5
February, 2023
5
November, 2019
4
August, 2017
2
April, 2020
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
274
bed bed3+
123
tsv
80
bigWig
40
bed bed9
14
bigBed narrowPeak
10
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
473
Homo sapiens
Biosample type
236
primary cell
194
tissue
40
cell line
3
in vitro differentiated cells
Organ
924
epithelium
637
kidney
445
brain
440
connective tissue
369
musculature of body
305
lung
intestine
273
pancreas
260
vasculature
250
heart
238
limb
206
bodily fluid
205
embryo
200
blood vessel
196
skin of body
195
blood
167
large intestine
151
liver
140
extraembryonic component
116
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
408
AMP
21
ENCODE
20
KPMP
20
T1D
2
LungMap
2
community
Genome assembly (visualization)
337
hg19
135
GRCh38
month_released!
June, 2020
organ_slims!
intestine
thymus
BIOSAMPLE
TYPE
473 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
chromatin state
differential activity
binding sites
eQTL
variant allelic effects
Fine-mapped variants
histone modifications
caQTL
sQTL
variant to gene
primary cell
endothelial cell of umbilical vein
1
4
6
5
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic ductal cell
5
3
3
3
1
1
2
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 32 more…
tissue
islet of Langerhans
5
11
1
3
2
13
1
2
1
2
2
body of pancreas
2
5
8
4
1
1
3
coronary artery
3
1
3
3
3
2
2
3
1
pancreas
3
5
5
3
1
1
1
1
tibial artery
2
1
2
3
3
2
2
3
+ See 15 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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