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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
197
candidate regulatory elements
149
target gene predictions
117
chromatin state
97
accessible chromatin
86
gene expression
52
binding sites
36
histone modifications
32
differential activity
30
eQTL
29
variant allelic effects
18
Fine-mapped variants
4
caQTL
2
pQTL
Date released
303
September, 2022
193
February, 2021
58
November, 2021
52
September, 2023
35
February, 2024
June, 2020
24
January, 2020
24
March, 2020
23
May, 2020
23
May, 2021
15
February, 2020
15
October, 2022
12
August, 2021
11
January, 2022
11
March, 2023
8
August, 2017
7
November, 2022
6
April, 2020
4
February, 2023
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
573
bed bed3+
134
tsv
109
bed bed9
85
bigWig
10
bigBed bed9
9
txt
1
bigBed narrowPeak
Organism
849
Homo sapiens
Biosample type
447
primary cell
308
tissue
53
in vitro differentiated cells
40
cell line
1
stem cell
Organ
924
epithelium
637
kidney
445
brain
440
connective tissue
369
musculature of body
305
lung
279
intestine
273
pancreas
260
vasculature
250
heart
238
limb
206
bodily fluid
205
embryo
200
blood vessel
196
skin of body
195
blood
167
large intestine
151
liver
140
extraembryonic component
116
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
727
AMP
58
ENCODE
50
KPMP
6
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
712
hg19
249
GRCh38
2
hg18
month_released!
June, 2020
BIOSAMPLE
TYPE
849 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
1
10
endothelial cell of umbilical vein
6
4
5
1
2
1
trophoblast cell
7
5
4
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 77 more…
tissue
placenta
26
15
14
1
2
1
adipose tissue
7
8
6
2
3
1
4
1
spinal cord
14
8
7
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
1
2
5
1
6
1
3
+ See 23 more…
in vitro differentiated cells
adipocyte
4
6
6
3
1
1
1
mesenchymal stem cell
3
3
2
1
1
chondrocyte
5
trophoblast cell
2
2
1
fibroblast
1
1
+ See 9 more…
cell line
GM23248
2
1
1
1
1
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
HTR-8/Svneo
1
1
1
fibroblast of cardiac tissue
1
2
+ See 10 more…
stem cell
mesenchymal stem cell
1
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