Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
155
candidate regulatory elements
116
target gene predictions
79
chromatin state
73
accessible chromatin
52
gene expression
42
binding sites
34
histone modifications
25
eQTL
18
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
210
September, 2022
165
February, 2021
60
November, 2021
June, 2020
20
February, 2024
19
May, 2021
17
September, 2023
13
October, 2022
11
August, 2021
10
January, 2020
10
January, 2022
10
May, 2020
10
May, 2024
9
February, 2020
9
March, 2020
8
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
451
bed bed3+
71
bed bed9
68
tsv
60
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
618
Homo sapiens
Biosample type
344
primary cell
139
tissue
82
cell line
52
in vitro differentiated cells
1
stem cell
Organ
934
epithelium
637
kidney
448
connective tissue
445
brain
369
musculature of body
305
lung
279
intestine
273
pancreas
263
vasculature
252
heart
238
limb
206
bodily fluid
205
embryo
200
blood vessel
196
skin of body
195
blood
167
large intestine
153
liver
140
extraembryonic component
116
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
23
lymphatic vessel
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
532
AMP
60
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
538
hg19
174
GRCh38
2
hg18
month_released!
June, 2020
BIOSAMPLE
TYPE
618 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
1
10
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
1
2
1
fibroblast of lung
6
4
4
2
+ See 52 more…
tissue
adipose tissue
7
8
6
2
3
1
4
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
thyroid gland
8
5
4
1
lower leg skin
6
2
2
+ See 15 more…
cell line
GM23248
2
1
1
1
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
HT1080
2
1
1
RPMI7951
2
1
1
+ See 21 more…
in vitro differentiated cells
adipocyte
4
6
6
3
1
1
1
mesenchymal stem cell
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
foreskin keratinocyte
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download