Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 96target gene predictions
  • 69candidate regulatory elements
  • 36chromatin state
  • 6binding sites
  • 5histone modifications
  • 3accessible chromatin
  • 2eQTL
  • 2gene expression
Date released
  • 98September, 2022
  • 52July, 2026
  • 46February, 2021
  • June, 2020
  • 6November, 2021
  • 5May, 2021
  • 3August, 2017
  • 3February, 2024
  • 2January, 2022
  • 2March, 2024
  • 1March, 2020
  • 1October, 2022
Available data
  • 184bed bed3+
  • 33bed bed9
  • 3bigWig
  • 2tsv
Organism
  • 219Homo sapiens
Collection Tags
  • 99EpiMap
  • 52ENCODE-rE2G
  • 37ENCODE
  • 10ChIP-Atlas
  • 6AMP
  • 6DGA
  • 6T2DKP
  • 24DN
  • 2GTEx
  • 2T1D
  • 2T2D
  • 2eQTLCatalogue
Biosample type
  • 159tissue
  • 54cell line
  • 6primary cell
Organ
  • 3353blood
  • 2896vasculature
  • 2857blood vessel
  • 2841bodily fluid
  • 2658vein
  • 927epithelium
  • 882brain
  • 741kidney
  • 498connective tissue
  • 483heart
  • 434lung
  • 380musculature of body
  • 348intestine
  • 315pancreas
  • 288skin of body
  • 238limb
  • 235liver
  • 219large intestine
  • 205embryo
  • 168extraembryonic component
  • 155eye
  • 141adipose tissue
  • 137stomach
  • 111muscle organ
  • 101adrenal gland
  • 101bone element
  • 100mammary gland
  • 96small intestine
  • 95placenta
  • 92thymus
  • 91uterus
  • 85artery
  • 82prostate gland
  • 72ureter
  • 62spleen
  • 61penis
  • 60__MARKER__
  • 60gonad
  • 54lymph node
  • 47spinal cord
  • 46esophagus
  • 46thyroid gland
  • 31ovary
  • 29testis
  • 24nerve
  • 24skeleton
  • 22lymphoid tissue
  • 20lymphatic vessel
  • 20mouth
  • 15bronchus
  • 14breast
  • 13bone marrow
  • 13pituitary gland
  • 12urinary bladder
  • 12vagina
  • 11tongue
  • 4trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 213AMP
  • 6ENCODE
Genome assembly (visualization)
  • 163hg19
  • 95GRCh38
month_released!
  • June, 2020
BIOSAMPLE
TYPE

219 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
tissue
large intestine2827131
sigmoid colon10105
transverse colon9841
colonic mucosa4431
mucosa of rectum243
cell line
HCT1161921
HT-2932111
SW48022111
Caco-231
RKO1111
primary cell
colon epithelial cell33
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego