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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
84
candidate regulatory elements
74
target gene predictions
66
accessible chromatin
48
gene expression
46
chromatin state
33
differential activity
16
eQTL
14
variant allelic effects
9
histone modifications
8
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
131
September, 2022
67
February, 2021
47
March, 2023
34
May, 2021
25
February, 2024
20
January, 2021
20
November, 2021
9
March, 2020
9
May, 2020
8
August, 2021
7
August, 2018
7
January, 2020
June, 2020
6
October, 2019
5
January, 2022
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
259
bed bed3+
76
tsv
62
bigWig
42
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
407
Homo sapiens
Biosample type
233
tissue
134
primary cell
37
cell line
3
in vitro differentiated cells
Organ
934
epithelium
637
kidney
448
connective tissue
445
brain
369
musculature of body
305
lung
279
intestine
273
pancreas
263
vasculature
252
heart
238
limb
206
bodily fluid
205
embryo
200
blood vessel
196
skin of body
195
blood
167
large intestine
153
liver
140
extraembryonic component
116
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
23
lymphatic vessel
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
365
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
315
hg19
96
GRCh38
month_released!
June, 2020
BIOSAMPLE
TYPE
407 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
chromatin state
differential activity
eQTL
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
placenta
26
15
14
1
2
1
islet of Langerhans
1
5
11
3
13
1
1
2
2
2
2
renal pelvis
19
9
1
9
1
body of pancreas
8
5
2
4
1
1
3
pancreas
5
5
3
3
1
1
1
1
+ See 10 more…
primary cell
pancreatic beta cell
3
8
3
3
1
pancreatic ductal cell
3
5
3
3
1
2
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 15 more…
cell line
EndoC_BH1
1
8
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
HTR-8/Svneo
1
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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