Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 61accessible chromatin
  • 48gene expression
  • 44target gene predictions
  • 33differential activity
  • 24candidate regulatory elements
  • 17chromatin state
  • 15eQTL
  • 11variant allelic effects
  • 6histone modifications
  • 5Fine-mapped variants
  • 5binding sites
  • 2sQTL
  • 2variant to gene
Date released
  • 47March, 2023
  • 44September, 2022
  • 33May, 2021
  • 31February, 2021
  • 25February, 2024
  • 20January, 2021
  • 18November, 2021
  • 9March, 2020
  • 8August, 2021
  • 7August, 2018
  • 6May, 2020
  • 6October, 2019
  • 4January, 2020
  • 4January, 2022
  • June, 2020
  • 3August, 2017
  • 2February, 2020
  • 2November, 2019
  • 1April, 2019
  • 1February, 2023
  • 1January, 2018
  • 1June, 2021
Available data
  • 167bed bed3+
  • 76tsv
  • 57bigWig
  • 14bigBed narrowPeak
  • 13bed bed9
  • 3bam
  • 3bed gappedPeak
  • 3csv
  • 3xls
  • 2bigBed bed9
Organism
  • 273Homo sapiens
Collection Tags
  • 67 T2DKP
  • 48HPAP
  • 48T1D
  • 47T2DKP
  • 42AMP
  • 39EpiMap
  • 31DGA
  • 11ENCODE
  • 10ChIP-Atlas
  • 9CMDGA
  • 7T2D
  • 5GTEx
  • 4eQTLCatalogue
Biosample type
  • 125primary cell
  • 111tissue
  • 34cell line
  • 3in vitro differentiated cells
Organ
  • 2907vasculature
  • 2847bodily fluid
  • 2844blood vessel
  • 2836blood
  • 2657vein
  • 933epithelium
  • 637kidney
  • 460connective tissue
  • 446brain
  • 374musculature of body
  • 305lung
  • 279intestine
  • 273pancreas
  • 252heart
  • 238limb
  • 205embryo
  • 196skin of body
  • 167large intestine
  • 158liver
  • 140extraembryonic component
  • 116stomach
  • 103eye
  • 98adipose tissue
  • 84bone element
  • 83mammary gland
  • 83small intestine
  • 81uterus
  • 76artery
  • 73prostate gland
  • 72adrenal gland
  • 71placenta
  • 63ureter
  • 61penis
  • 54lymph node
  • 48thymus
  • 46gonad
  • 43esophagus
  • 41spinal cord
  • 33spleen
  • 24nerve
  • 24testis
  • 23lymphatic vessel
  • 22lymphoid tissue
  • 22ovary
  • 22thyroid gland
  • 18mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 13pituitary gland
  • 12breast
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 4trachea
  • 3nose
  • 1pericardium
Project
  • 233AMP
  • 20T1D
  • 18ENCODE
  • 2community
Genome assembly (visualization)
  • 182hg19
  • 61GRCh38
month_released!
  • June, 2020
BIOSAMPLE
TYPE

273 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
primary cell
pancreatic beta cell83331
pancreatic ductal cell5333121
pancreatic alpha cell73331
pancreatic acinar cell63331
pancreatic delta cell53431
tissue
islet of Langerhans5111313112222
body of pancreas2584113
pancreas35531111
endocrine pancreas474
pancreatic ductal cell2
cell line
EndoC_BH188131
Panc1221
8988T111
HPDE6-E6E7111
pancreatic acinar cell1
in vitro differentiated cells
pancreatic ductal cell3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego