Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 20candidate regulatory elements
  • 14target gene predictions
  • 11chromatin state
  • 1accessible chromatin
  • 1binding sites
  • 1histone modifications
Date released
  • 33September, 2022
  • 11February, 2021
  • June, 2020
  • 1March, 2020
  • 1May, 2020
  • 1May, 2021
  • 1November, 2021
Available data
  • 37bed bed3+
  • 11bed bed9
  • 1bigWig
Organism
  • 48Homo sapiens
Collection Tags
  • 33EpiMap
  • 9ENCODE
  • 2ChIP-Atlas
  • 2DGA
  • 1AMP
  • 1BLUEPRINT
  • 1T1D
  • 1T2DKP
Biosample type
  • 47tissue
  • 1primary cell
Organ
  • 2907vasculature
  • 2847bodily fluid
  • 2844blood vessel
  • 2836blood
  • 2657vein
  • 933epithelium
  • 637kidney
  • 460connective tissue
  • 446brain
  • 374musculature of body
  • 305lung
  • 279intestine
  • 273pancreas
  • 252heart
  • 238limb
  • 205embryo
  • 196skin of body
  • 167large intestine
  • 158liver
  • 140extraembryonic component
  • 116stomach
  • 103eye
  • 98adipose tissue
  • 84bone element
  • 83mammary gland
  • 83small intestine
  • 81uterus
  • 76artery
  • 73prostate gland
  • 72adrenal gland
  • 71placenta
  • 63ureter
  • 61penis
  • 54lymph node
  • 48thymus
  • 46gonad
  • 43esophagus
  • 41spinal cord
  • 33spleen
  • 24nerve
  • 24testis
  • 23lymphatic vessel
  • 22lymphoid tissue
  • 22ovary
  • 22thyroid gland
  • 18mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 13pituitary gland
  • 12breast
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 4trachea
  • 3nose
  • 1pericardium
Project
  • 47AMP
  • 1ENCODE
Genome assembly (visualization)
  • 48hg19
  • 12GRCh38
month_released!
  • June, 2020
BIOSAMPLE
TYPE

48 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
tissue
thymus20141111
primary cell
fetal thymocyte1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego