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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • 689gene expression
  • 624accessible chromatin
  • 189eQTL
  • 172differential activity
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 5variant allelic effects
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2589February, 2021
  • 2511September, 2022
  • 389May, 2021
  • 333November, 2021
  • 322February, 2024
  • June, 2020
  • 286September, 2023
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 76May, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5676bed bed3+
  • 3576tsv
  • 869bed bed9
  • 542bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 12bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10195Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1559ChIP-Atlas
  • 964ENCODE
  • 534AMP
  • 516DGA
  • 421T1D
  • 402T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 164 T2DKP
  • 151GTEx
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5212tissue
  • 2384primary cell
  • 2198cell line
  • 443in vitro differentiated cells
  • 4stem cell
Organ
  • 2892vasculature
  • 2847bodily fluid
  • 2836blood
  • 2835blood vessel
  • 2656vein
  • 892epithelium
  • 621kidney
  • 444connective tissue
  • 429brain
  • 367musculature of body
  • 304lung
  • 276intestine
  • 262pancreas
  • 242heart
  • 230limb
  • 205embryo
  • 195skin of body
  • 167large intestine
  • 154liver
  • 140extraembryonic component
  • 114stomach
  • 101eye
  • 95adipose tissue
  • 84bone element
  • 83small intestine
  • 82mammary gland
  • 81uterus
  • 72artery
  • 72prostate gland
  • 71adrenal gland
  • 71placenta
  • 61penis
  • 60ureter
  • 54lymph node
  • 48thymus
  • 46gonad
  • 41esophagus
  • 41spinal cord
  • 33spleen
  • 24testis
  • 23lymphatic vessel
  • 22lymphoid tissue
  • 22nerve
  • 22ovary
  • 21thyroid gland
  • 18mouth
  • 18skeleton
  • 14bronchus
  • 13bone marrow
  • 13pituitary gland
  • 12breast
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 4trachea
  • 3nose
  • 1pericardium
Project
  • 9532AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6594hg19
  • 1909GRCh38
  • 4hg18
month_released!
  • June, 2020
software_used.software.name!
  • deltasvm
BIOSAMPLE
TYPE

10243 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
binding sites
gene expression
accessible chromatin
eQTL
differential activity
Fine-mapped variants
caQTL
sQTL
hQTL
variant allelic effects
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720121133
stomach402111911
kidney29142161791
brain29163181112
primary cell
monocyte286115164121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530134
B cell1710826
endothelial cell371291512
cell line
HeLa-S355531
A54921191182
H1-hESC1391128
K562723172
MCF-796253
in vitro differentiated cells
neural progenitor cell55154710
hematopoietic multipotent progenitor cell191011011
adipocyte4616113
embryonic stem cell11516
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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