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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • 689gene expression
  • 624accessible chromatin
  • 172differential activity
  • 141variant allelic effects
  • 72Fine-mapped variants
  • 60eQTL
  • 13caQTL
  • 5hQTL
  • 4sQTL
  • 3meQTL
  • 3other
  • 2variant to gene
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2589February, 2021
  • 2511September, 2022
  • 389May, 2021
  • 373February, 2024
  • 333November, 2021
  • June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 101October, 2022
  • 89January, 2020
  • 64March, 2023
  • 63February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 38May, 2024
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 11March, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 5January, 2022
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5688bed bed3+
  • 3541tsv
  • 869bed bed9
  • 546bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 24csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10183Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1559ChIP-Atlas
  • 966ENCODE
  • 640DGA
  • 534AMP
  • 406T2DKP
  • 320T1D
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 168 T2DKP
  • 151GTEx
  • 94CMDGA
  • 67HPAP
  • 26FNIH_projects-heart
  • 16STARNET
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 10T2D
Biosample type
  • 5172tissue
  • 2414primary cell
  • 2190cell line
  • 449in vitro differentiated cells
  • 4stem cell
Organ
  • 2898vasculature
  • 2841bodily fluid
  • 2835blood vessel
  • 2830blood
  • 2657vein
  • 932epithelium
  • 636kidney
  • 443connective tissue
  • 429brain
  • 367musculature of body
  • 304lung
  • 276intestine
  • 263pancreas
  • 249heart
  • 236limb
  • 205embryo
  • 193skin of body
  • 165large intestine
  • 154liver
  • 139extraembryonic component
  • 115stomach
  • 102eye
  • 89adipose tissue
  • 84bone element
  • 83mammary gland
  • 82small intestine
  • 80uterus
  • 72prostate gland
  • 71adrenal gland
  • 70artery
  • 70placenta
  • 63ureter
  • 61penis
  • 54lymph node
  • 48thymus
  • 43gonad
  • 40esophagus
  • 40spinal cord
  • 32spleen
  • 23lymphatic vessel
  • 23nerve
  • 22lymphoid tissue
  • 22testis
  • 21ovary
  • 21thyroid gland
  • 18skeleton
  • 17mouth
  • 15bronchus
  • 13bone marrow
  • 12pituitary gland
  • 11breast
  • 9tongue
  • 9urinary bladder
  • 9vagina
  • 4trachea
  • 3nose
  • 1pericardium
Project
  • 9524AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 9community
  • 5ITG
Genome assembly (visualization)
  • 6708hg19
  • 1807GRCh38
  • 4hg18
month_released!
  • June, 2020
software_used.software.name!
  • qTLtools
BIOSAMPLE
TYPE

10231 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
binding sites
gene expression
accessible chromatin
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
hQTL
sQTL
meQTL
other
variant to gene
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37201211332
stomach40211191
kidney291421617911
brain29163181111
primary cell
monocyte286115161211
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530134
B cell1710826
endothelial cell371291522
cell line
HeLa-S355531
A54921191182
H1-hESC1391128
K562723172
MCF-796253
in vitro differentiated cells
neural progenitor cell55154710
hematopoietic multipotent progenitor cell191011011
adipocyte4616113
embryonic stem cell11516
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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