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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • 977histone modifications
  • 944chromatin state
  • 876candidate regulatory elements
  • 817binding sites
  • 624accessible chromatin
  • 524target gene predictions
  • 186eQTL
  • 141variant allelic effects
  • 130differential activity
  • 84Fine-mapped variants
  • 15gene expression
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2413February, 2021
  • 846September, 2022
  • 333November, 2021
  • 312February, 2024
  • 299May, 2021
  • June, 2020
  • 155May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 101October, 2022
  • 75August, 2021
  • 72January, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 26February, 2020
  • 19April, 2020
  • 15March, 2023
  • 14November, 2019
  • 14October, 2019
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 4126bed bed3+
  • 2903tsv
  • 869bed bed9
  • 546bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 7945Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1559ChIP-Atlas
  • 938ENCODE
  • 833EpiMap
  • 438DGA
  • 425AMP
  • 402T2DKP
  • 327T1D
  • 181BLUEPRINT
  • 1744DN
  • 130 T2DKP
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 4228tissue
  • 1821cell line
  • 1633primary cell
  • 305in vitro differentiated cells
  • 4stem cell
Organ
  • 2824vasculature
  • 2795bodily fluid
  • 2789blood
  • 2782blood vessel
  • 2652vein
  • 566epithelium
  • 325connective tissue
  • 307brain
  • 285kidney
  • 227musculature of body
  • 167pancreas
  • 166intestine
  • 164lung
  • 159heart
  • 141embryo
  • 141limb
  • 126skin of body
  • 111liver
  • 99large intestine
  • 84eye
  • 74extraembryonic component
  • 71uterus
  • 69adipose tissue
  • 68stomach
  • 56artery
  • 55mammary gland
  • 52bone element
  • 46prostate gland
  • 45small intestine
  • 43adrenal gland
  • 41penis
  • 39placenta
  • 38lymph node
  • 37ureter
  • 28gonad
  • 27esophagus
  • 26thymus
  • 24spinal cord
  • 20spleen
  • 16lymphatic vessel
  • 16nerve
  • 15testis
  • 13ovary
  • 13thyroid gland
  • 12pituitary gland
  • 12skeleton
  • 11bone marrow
  • 11bronchus
  • 11lymphoid tissue
  • 9mouth
  • 7breast
  • 5vagina
  • 4tongue
  • 4trachea
  • 4urinary bladder
  • 1nose
Project
  • 7453AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5032hg19
  • 1909GRCh38
  • 4hg18
month_released!
  • June, 2020
software_used.software.name!
  • r
BIOSAMPLE
TYPE

7993 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
chromatin state
candidate regulatory elements
binding sites
accessible chromatin
target gene predictions
eQTL
variant allelic effects
differential activity
Fine-mapped variants
gene expression
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart121181312
kidney216151911
stomach1192121
brain318131121
cell line
HeLa-S332152
H1-hESC11238
K562171217
A549118321
breast cancer cell119
primary cell
monocyte8611624121
CD8-positive, alpha-beta T cell301745
endothelial cell132157122
fibroblast3116426
macrophage31239311
in vitro differentiated cells
neural progenitor cell1541101
hematopoietic multipotent progenitor cell11091
adipocyte162134
embryonic stem cell15161
T-cell acute lymphoblastic leukemia53
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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