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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
43
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
March, 2024
March, 2020
1
October, 2022
Available data
136
bed bed3+
33
bed bed9
3
bigWig
Organism
171
Homo sapiens
Biosample type
131
tissue
34
cell line
6
primary cell
Organ
926
epithelium
628
kidney
441
connective tissue
408
brain
359
musculature of body
309
lung
284
intestine
262
pancreas
238
vasculature
229
heart
224
limb
217
bodily fluid
214
embryo
206
blood
202
skin of body
180
blood vessel
171
large intestine
146
extraembryonic component
143
liver
116
stomach
107
eye
88
bone element
87
mammary gland
83
small intestine
81
uterus
adipose tissue
77
prostate gland
73
placenta
71
adrenal gland
64
artery
64
penis
62
lymph node
61
ureter
47
gonad
47
thymus
42
esophagus
40
spinal cord
32
spleen
25
testis
23
lymphoid tissue
22
thyroid gland
21
lymphatic vessel
21
ovary
19
nerve
19
vein
18
mouth
18
skeleton
16
bronchus
12
bone marrow
12
breast
12
pituitary gland
9
tongue
9
vagina
8
urinary bladder
5
trachea
4
nose
1
pericardium
Project
165
AMP
6
ENCODE
Genome assembly (visualization)
169
hg19
43
GRCh38
month_released!
March, 2020
March, 2024
May, 2020
organ_slims!
adipose tissue
BIOSAMPLE
TYPE
171 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
6
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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