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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
250
gene expression
216
accessible chromatin
141
target gene predictions
138
candidate regulatory elements
92
differential activity
73
chromatin state
49
binding sites
32
histone modifications
27
variant allelic effects
6
eQTL
2
caQTL
Date released
222
February, 2021
211
September, 2022
155
September, 2023
128
November, 2021
76
February, 2024
38
March, 2023
35
May, 2021
29
June, 2020
23
August, 2021
20
January, 2021
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
8
October, 2022
7
April, 2020
6
August, 2018
March, 2020
5
October, 2019
3
August, 2017
3
January, 2022
3
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
607
bed bed3+
325
tsv
176
bigWig
78
txt
70
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1026
Homo sapiens
Biosample type
811
primary cell
139
tissue
50
cell line
26
in vitro differentiated cells
Organ
928
epithelium
630
kidney
441
connective tissue
409
brain
361
musculature of body
310
lung
287
intestine
262
pancreas
239
vasculature
229
heart
225
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
181
blood vessel
173
large intestine
146
extraembryonic component
143
liver
118
stomach
107
eye
88
bone element
87
mammary gland
83
small intestine
83
uterus
78
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
64
artery
64
penis
62
lymph node
61
ureter
49
gonad
47
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
ovary
21
lymphatic vessel
20
vein
19
mouth
19
nerve
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
714
AMP
155
KPMP
128
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
680
hg19
257
GRCh38
month_released!
March, 2020
May, 2020
BIOSAMPLE
TYPE
1026 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
9
8
3
1
1
1
4
1
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
foreskin keratinocyte
4
11
4
+ See 146 more…
tissue
placenta
1
15
26
14
1
2
1
pigmented layer of retina
20
testis
1
1
3
7
3
1
1
1
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
+ See 17 more…
cell line
EndoC_BH1
8
8
3
NT2-D1 cell
1
1
1
1
2
keratinocyte
3
1
HTR-8/Svneo
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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