Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
59
accessible chromatin
40
target gene predictions
39
candidate regulatory elements
33
differential activity
29
gene expression
23
chromatin state
16
eQTL
11
variant allelic effects
6
histone modifications
5
binding sites
2
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
62
September, 2022
47
March, 2023
41
February, 2021
May, 2021
25
February, 2024
20
January, 2021
18
November, 2021
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
January, 2022
5
June, 2020
4
January, 2020
3
August, 2017
3
November, 2019
2
February, 2020
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
164
bed bed3+
58
bigWig
56
tsv
19
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
267
Homo sapiens
Biosample type
133
tissue
114
primary cell
17
cell line
3
in vitro differentiated cells
Organ
919
epithelium
649
kidney
443
connective tissue
417
brain
360
musculature of body
306
lung
281
intestine
254
vasculature
238
heart
235
pancreas
232
limb
214
bodily fluid
207
embryo
203
blood
199
skin of body
189
blood vessel
168
large intestine
145
liver
143
extraembryonic component
116
stomach
109
eye
89
bone element
85
mammary gland
82
small intestine
81
uterus
78
adipose tissue
76
prostate gland
72
placenta
70
adrenal gland
67
artery
64
ureter
63
penis
61
lymph node
48
gonad
47
thymus
44
esophagus
39
spinal cord
32
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
22
nerve
22
thyroid gland
21
ovary
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
227
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
194
hg19
66
GRCh38
month_released!
March, 2020
May, 2021
BIOSAMPLE
TYPE
267 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
gene expression
chromatin state
eQTL
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
5
1
7
3
13
1
1
1
2
2
2
spleen
2
6
15
1
6
1
1
body of pancreas
4
8
2
4
1
1
pancreas
5
2
5
3
1
1
1
1
endocrine pancreas
4
7
4
+ See 7 more…
primary cell
pancreatic beta cell
8
3
3
2
1
pancreatic ductal cell
6
2
3
2
1
2
1
pancreatic alpha cell
7
3
3
2
1
pancreatic delta cell
5
4
3
2
1
pancreatic acinar cell
6
2
3
2
1
+ See 10 more…
cell line
EndoC_BH1
1
3
1
Panc1
1
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download