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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
11
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
24
histone
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
18
October, 2019
1
February, 2020
Available data
18
bam
7
bigWig
5
tsv
3
bed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
Organism
19
Homo sapiens
Biosample type
19
tissue
Organ
781
pancreas
685
liver
604
connective tissue
458
adipose tissue
423
epithelium
322
kidney
289
heart
161
vasculature
159
bone element
156
blood vessel
121
artery
97
brain
73
limb
68
blood
68
bodily fluid
58
eye
58
musculature of body
25
embryo
19
lung
19
nerve
18
spleen
18
ureter
16
skeleton
6
vein
2
pericardium
1
bone marrow
1
pituitary gland
1
skin of body
1
spinal cord
1
thymus
Project
19
AMP
Genome assembly (visualization)
7
GRCh38
7
hg19
Lab
19
AMP-T2D consortium
month_released!
March, 2020
October, 2022
organ_slims!
ovary
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
11
5
2
1
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