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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
251
gene expression
229
accessible chromatin
198
target gene predictions
185
candidate regulatory elements
100
chromatin state
95
binding sites
92
differential activity
57
histone modifications
41
variant allelic effects
8
eQTL
2
caQTL
1
pQTL
Date released
296
February, 2021
286
September, 2022
155
September, 2023
128
November, 2021
104
February, 2024
41
June, 2020
39
May, 2021
38
March, 2023
27
October, 2022
26
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
March, 2020
5
August, 2017
5
October, 2019
4
March, 2024
3
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
809
bed bed3+
326
tsv
177
bigWig
95
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1259
Homo sapiens
Biosample type
833
primary cell
257
cell line
143
tissue
26
in vitro differentiated cells
Organ
943
epithelium
649
kidney
451
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
947
AMP
155
KPMP
128
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
909
hg19
311
GRCh38
month_released!
March, 2020
BIOSAMPLE
TYPE
1259 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
caQTL
pQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
9
8
3
1
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
3
6
5
2
1
+ See 151 more…
cell line
K562
1
23
7
7
2
1
EndoC_BH1
8
8
3
1
GM12878
1
8
2
2
2
1
GM06990
1
1
2
1
2
1
GM19240
1
2
1
1
2
1
+ See 40 more…
tissue
placenta
1
15
26
14
1
2
1
pigmented layer of retina
20
testis
1
1
3
7
3
1
1
1
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
+ See 20 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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