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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
250
gene expression
217
accessible chromatin
129
target gene predictions
121
candidate regulatory elements
92
differential activity
59
chromatin state
45
binding sites
41
variant allelic effects
30
histone modifications
6
eQTL
2
caQTL
Date released
206
February, 2021
166
September, 2022
155
September, 2023
132
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
26
June, 2020
23
August, 2021
22
January, 2021
16
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
May, 2024
9
February, 2020
7
April, 2020
March, 2020
6
August, 2018
6
October, 2022
5
October, 2019
3
August, 2017
3
January, 2022
3
March, 2024
3
May, 2022
1
July, 2020
1
November, 2019
Available data
584
bed bed3+
325
tsv
180
bigWig
78
txt
55
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
1
bed bed9+
Organism
992
Homo sapiens
Biosample type
841
primary cell
83
tissue
42
cell line
26
in vitro differentiated cells
Organ
953
epithelium
649
kidney
459
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
257
vasculature
242
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
148
liver
146
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
674
AMP
155
KPMP
132
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
643
hg19
257
GRCh38
month_released!
March, 2020
BIOSAMPLE
TYPE
992 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
3
2
2
1
1
2
hepatocyte
9
8
3
2
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
3
6
5
2
1
+ See 152 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus muscularis mucosa
1
2
5
2
1
esophagus squamous epithelium
1
2
6
2
esophagus
2
4
2
1
+ See 19 more…
cell line
EndoC_BH1
8
8
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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