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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 341target gene predictions
  • 193accessible chromatin
  • 111candidate regulatory elements
  • 72chromatin state
  • 48histone modifications
  • 29eQTL
  • 19gene expression
  • 18differential activity
  • 18variant allelic effects
  • 16binding sites
Date released
  • 418July, 2026
  • 180September, 2022
  • 110February, 2021
  • March, 2020
  • 29January, 2020
  • 21June, 2020
  • 19May, 2020
  • 18February, 2020
  • 18January, 2022
  • 18May, 2026
  • 11May, 2021
  • 6August, 2017
  • 6October, 2022
  • 4May, 2019
  • 3September, 2023
  • 1February, 2024
  • 1February, 2025
  • 1March, 2024
  • 1November, 2019
Available data
  • 742bed bed3+
  • 66bed bed9
  • 31tsv
  • 21bigWig
  • 6bigBed bed9
Organism
  • 864Homo sapiens
Collection Tags
  • 249ENCODE-rE2G
  • 180EpiMap
  • 133CATlas
  • 79ChIP-Atlas
  • 62ENCODE
  • 36HDMA
  • 31DGA
  • 25GTEx
  • 18pyxis
  • 17T1D
  • 17T2D
  • 17eQTLCatalogue
  • 5AMP
Biosample type
  • 531tissue
  • 231primary cell
  • 90cell line
  • 12in vitro differentiated cells
  • 1stem cell
Organ
  • 3365blood
  • 2890vasculature
  • 2853bodily fluid
  • 2849blood vessel
  • 2658vein
  • 946epithelium
  • 865brain
  • 753kidney
  • 509connective tissue
  • 473heart
  • 439lung
  • 377musculature of body
  • 356intestine
  • 310pancreas
  • 296skin of body
  • 235limb
  • 230liver
  • 225large intestine
  • 214embryo
  • 174extraembryonic component
  • 161eye
  • 139stomach
  • 134adipose tissue
  • 111muscle organ
  • 106bone element
  • 104mammary gland
  • 101adrenal gland
  • 97placenta
  • 96small intestine
  • 93uterus
  • 92thymus
  • 87prostate gland
  • 82artery
  • 73ureter
  • 64penis
  • 63gonad
  • 62lymph node
  • 62spleen
  • 60__MARKER__
  • 47esophagus
  • 47thyroid gland
  • 46spinal cord
  • 31ovary
  • 31testis
  • 24lymphoid tissue
  • 24skeleton
  • 22nerve
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 12tongue
  • 12urinary bladder
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 865AMP
Genome assembly (visualization)
  • 534GRCh38
  • 385hg19
month_released!
  • March, 2020
BIOSAMPLE
TYPE

865 results

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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
chromatin state
histone modifications
eQTL
gene expression
differential activity
variant allelic effects
binding sites
tissue
brain302291832111
head of caudate nucleus86
dorsolateral prefrontal cortex5611
posterior cingulate gyrus48
caudate nucleus42541211
primary cell
glutamatergic neuron815
GABAergic neuron22
astrocyte182
choroid plexus epithelial cell212111
medium spiny neuron8
cell line
SK-N-DZ41421
SK-N-SH5421
pituitary stalk10
SK-N-MC212112
BE(2)-C111112
in vitro differentiated cells
brain2
hippocampal neuron11
ESC dervived hypothalamic neuron (arcuate nucleus)1
ESC dervived hypothalamic progenitor (arcuate nucleus)1
astrocyte1
stem cell
undifferentiated ESC (H9 cell line)1
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