Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
candidate regulatory elements
80
target gene predictions
75
accessible chromatin
52
chromatin state
47
gene expression
33
differential activity
17
eQTL
11
histone modifications
11
variant allelic effects
7
binding sites
2
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
149
September, 2022
67
February, 2021
47
March, 2023
37
May, 2021
25
February, 2024
21
November, 2021
20
January, 2021
11
June, 2020
March, 2020
8
August, 2021
7
August, 2018
6
January, 2022
6
May, 2020
6
October, 2019
4
January, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
October, 2022
Available data
276
bed bed3+
72
tsv
60
bigWig
48
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
427
Homo sapiens
Biosample type
217
tissue
166
primary cell
36
cell line
8
in vitro differentiated cells
Organ
953
epithelium
649
kidney
459
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
257
vasculature
242
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
148
liver
146
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
384
AMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
335
hg19
98
GRCh38
month_released!
March, 2020
BIOSAMPLE
TYPE
427 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
histone modifications
variant allelic effects
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
placenta
26
15
1
14
1
2
1
islet of Langerhans
1
6
3
9
13
1
1
1
2
2
2
body of pancreas
8
5
4
2
1
1
pancreas
5
3
5
3
1
1
1
1
chorionic villus
8
4
4
+ See 15 more…
primary cell
pancreatic ductal cell
3
6
3
3
2
1
1
pancreatic beta cell
3
8
3
3
1
trophoblast cell
7
5
1
4
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 22 more…
cell line
EndoC_BH1
8
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
HTR-8/Svneo
1
1
1
+ See 2 more…
in vitro differentiated cells
trophoblast cell
2
2
1
pancreatic ductal cell
3
See all biosamples
Download