Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
91
accessible chromatin
84
candidate regulatory elements
78
target gene predictions
50
chromatin state
49
gene expression
33
binding sites
26
histone modifications
21
eQTL
17
variant allelic effects
14
differential activity
2
caQTL
2
pQTL
Date released
126
September, 2022
114
February, 2021
52
November, 2021
21
June, 2020
19
February, 2024
17
September, 2023
16
May, 2021
12
October, 2022
11
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
March, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
4
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
341
bed bed3+
59
tsv
57
bigWig
43
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
467
Homo sapiens
Biosample type
299
primary cell
88
tissue
49
in vitro differentiated cells
31
cell line
Organ
943
epithelium
649
kidney
451
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
388
AMP
52
ENCODE
15
KPMP
4
ITG
4
LungMap
2
T1D
2
community
Genome assembly (visualization)
394
hg19
120
GRCh38
2
hg18
month_released!
March, 2020
organ_slims!
blood
skeleton
BIOSAMPLE
TYPE
467 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
+ See 47 more…
tissue
adipose tissue
2
7
7
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
omental fat pad
2
5
2
2
2
2
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 6 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
See all biosamples
Download