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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
204
candidate regulatory elements
190
target gene predictions
108
accessible chromatin
103
chromatin state
61
gene expression
55
binding sites
44
histone modifications
24
eQTL
17
variant allelic effects
14
differential activity
2
caQTL
2
pQTL
Date released
279
September, 2022
213
February, 2021
70
February, 2024
60
November, 2021
34
June, 2020
25
May, 2021
19
August, 2021
17
September, 2023
14
October, 2022
10
January, 2020
March, 2020
10
May, 2020
10
May, 2024
9
August, 2017
9
February, 2020
9
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
632
bed bed3+
94
bed bed9
71
tsv
61
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
824
Homo sapiens
Biosample type
374
primary cell
216
cell line
147
tissue
86
in vitro differentiated cells
1
stem cell
Organ
953
epithelium
649
kidney
459
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
257
vasculature
242
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
148
liver
146
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
738
AMP
60
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
736
hg19
241
GRCh38
2
hg18
month_released!
March, 2020
BIOSAMPLE
TYPE
824 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
caQTL
pQTL
primary cell
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
10
1
foreskin keratinocyte
11
4
4
trophoblast cell
7
5
1
4
1
keratinocyte
3
5
2
3
1
2
1
+ See 56 more…
cell line
H1-hESC
1
39
1
1
8
2
1
H9
7
8
1
GM23248
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
HUES6
2
1
1
1
1
+ See 43 more…
tissue
adipose tissue
7
7
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
chorionic villus
8
4
4
omental fat pad
5
2
2
2
2
2
lower leg skin
6
2
2
+ See 19 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
chondrocyte
5
+ See 17 more…
stem cell
H1-hESC
1
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