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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
240
candidate regulatory elements
199
target gene predictions
127
accessible chromatin
122
chromatin state
89
differential activity
27
variant allelic effects
24
binding sites
23
histone modifications
19
eQTL
2
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
350
September, 2022
272
February, 2021
140
September, 2023
77
February, 2024
47
March, 2023
44
August, 2021
40
May, 2021
29
June, 2020
25
May, 2020
23
November, 2021
20
January, 2021
18
January, 2020
March, 2020
11
February, 2020
7
August, 2018
6
October, 2019
5
January, 2022
4
August, 2017
3
October, 2022
2
April, 2019
2
March, 2024
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
641
bed bed3+
329
tsv
117
bed bed9
95
bigWig
87
txt
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
1131
Homo sapiens
Biosample type
457
primary cell
441
tissue
198
cell line
34
in vitro differentiated cells
1
stem cell
Organ
953
epithelium
649
kidney
459
connective tissue
428
brain
366
musculature of body
lung
287
intestine
268
pancreas
257
vasculature
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
148
liver
146
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
946
AMP
140
KPMP
23
ENCODE
20
T1D
2
community
Genome assembly (visualization)
770
hg19
243
GRCh38
month_released!
March, 2020
organ_slims!
heart
lung
BIOSAMPLE
TYPE
1131 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
sQTL
variant to gene
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
pancreatic ductal cell
3
3
6
3
1
1
2
pancreatic beta cell
3
3
8
3
1
trophoblast cell
7
5
1
4
1
+ See 84 more…
tissue
kidney
7
29
14
10
16
1
1
2
1
right kidney
20
10
1
10
1
islet of Langerhans
9
1
6
3
1
1
1
13
2
2
2
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
+ See 32 more…
cell line
H1-hESC
8
1
39
1
1
2
1
EndoC_BH1
8
8
3
1
H9
7
8
1
HEK293
3
1
1
1
2
1
H7-hESC
1
2
1
1
1
+ See 29 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 5 more…
stem cell
H1-hESC
1
See all biosamples
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