Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
95
target gene predictions
69
candidate regulatory elements
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
52
July, 2026
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
March, 2020
1
October, 2022
Available data
190
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
225
Homo sapiens
Collection Tags
99
EpiMap
52
ENCODE-rE2G
37
ENCODE
17
ChIP-Atlas
6
AMP
6
T2DKP
5
DGA
2
4DN
2
GTEx
2
T1D
2
T2D
2
eQTLCatalogue
Biosample type
161
tissue
58
cell line
6
primary cell
Organ
3365
blood
2890
vasculature
2853
bodily fluid
2849
blood vessel
2658
vein
946
epithelium
865
brain
753
kidney
509
connective tissue
473
heart
439
lung
377
musculature of body
356
intestine
310
pancreas
296
skin of body
235
limb
230
liver
225
large intestine
214
embryo
174
extraembryonic component
161
eye
139
stomach
134
adipose tissue
111
muscle organ
106
bone element
104
mammary gland
101
adrenal gland
97
placenta
96
small intestine
93
uterus
92
thymus
87
prostate gland
82
artery
73
ureter
64
penis
63
gonad
62
lymph node
62
spleen
60
__MARKER__
47
esophagus
47
thyroid gland
46
spinal cord
31
ovary
31
testis
24
lymphoid tissue
24
skeleton
22
nerve
21
lymphatic vessel
21
mouth
16
bronchus
15
breast
13
bone marrow
13
pituitary gland
12
tongue
12
urinary bladder
12
vagina
5
trachea
4
nose
1
embryonic structure
1
gallbladder
1
pericardium
Project
219
AMP
6
ENCODE
Genome assembly (visualization)
169
hg19
95
GRCh38
month_released!
March, 2020
BIOSAMPLE
TYPE
225 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
28
27
13
1
1
sigmoid colon
9
10
5
1
transverse colon
9
8
4
1
1
colonic mucosa
4
4
3
1
mucosa of rectum
2
4
3
+ See 9 more…
cell line
HCT116
19
2
1
HT-29
3
2
1
1
1
1
SW480
2
2
1
1
1
1
RKO
1
1
1
1
1
Caco-2
3
1
+ See 4 more…
primary cell
colon epithelial cell
3
3
See all biosamples
Download