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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
217
candidate regulatory elements
181
target gene predictions
118
chromatin state
104
accessible chromatin
58
binding sites
51
gene expression
38
histone modifications
23
eQTL
18
variant allelic effects
9
Fine-mapped variants
2
caQTL
2
differential activity
1
pQTL
1
sQTL
Date released
323
September, 2022
197
February, 2021
68
February, 2024
March, 2023
43
May, 2021
29
November, 2021
22
June, 2020
22
October, 2022
20
January, 2021
18
March, 2020
12
August, 2021
11
May, 2020
9
January, 2020
8
August, 2017
8
February, 2020
7
August, 2018
7
October, 2019
5
January, 2022
3
March, 2024
3
May, 2022
2
May, 2019
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
630
bed bed3+
109
bed bed9
73
bigWig
50
tsv
14
bigBed narrowPeak
5
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
823
Homo sapiens
Biosample type
418
tissue
254
cell line
146
primary cell
5
in vitro differentiated cells
Organ
921
epithelium
652
kidney
466
brain
461
connective tissue
375
musculature of body
311
lung
289
intestine
265
vasculature
257
heart
244
limb
230
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
774
AMP
29
ENCODE
20
T1D
Genome assembly (visualization)
770
hg19
210
GRCh38
month_released!
March, 2023
BIOSAMPLE
TYPE
823 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
caQTL
differential activity
pQTL
sQTL
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
islet of Langerhans
1
3
6
2
11
1
12
1
1
body of pancreas
8
5
4
2
1
1
3
+ See 32 more…
cell line
K562
7
23
7
1
2
1
EndoC_BH1
1
8
8
1
1
GM12878
2
8
2
1
2
1
GM06990
2
1
1
1
2
1
GM19240
1
2
1
1
2
1
+ See 35 more…
primary cell
pancreatic ductal cell
3
6
1
2
2
1
pancreatic beta cell
3
8
2
1
pancreatic alpha cell
3
7
2
1
skeletal muscle satellite cell
2
2
2
5
2
pancreatic acinar cell
3
6
2
1
+ See 19 more…
in vitro differentiated cells
pancreatic ductal cell
3
myotube
1
1
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