Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
111
accessible chromatin
106
candidate regulatory elements
102
target gene predictions
71
gene expression
67
chromatin state
43
binding sites
37
histone modifications
29
eQTL
19
variant allelic effects
9
Fine-mapped variants
9
differential activity
3
caQTL
2
pQTL
Date released
172
September, 2022
132
February, 2021
54
November, 2021
47
February, 2024
26
June, 2020
21
August, 2021
20
March, 2020
19
May, 2021
17
September, 2023
13
October, 2022
12
January, 2020
12
May, 2020
11
February, 2020
March, 2023
10
August, 2017
7
January, 2022
7
November, 2022
5
May, 2022
3
April, 2020
3
November, 2020
3
September, 2018
2
January, 2021
2
May, 2024
2
October, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
March, 2024
1
November, 2019
Available data
433
bed bed3+
82
tsv
76
bigWig
57
bed bed9
7
txt
3
bigBed bed9
3
csv
1
bam
1
bigBed narrowPeak
Organism
608
Homo sapiens
Biosample type
326
primary cell
163
tissue
61
in vitro differentiated cells
57
cell line
1
stem cell
Organ
911
epithelium
652
kidney
466
brain
453
connective tissue
375
musculature of body
311
lung
289
intestine
262
vasculature
255
heart
244
limb
230
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
528
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
515
hg19
182
GRCh38
4
hg18
month_released!
March, 2023
BIOSAMPLE
TYPE
608 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
pQTL
primary cell
hepatocyte
8
1
3
13
1
1
4
2
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
2
1
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 46 more…
tissue
liver
4
13
10
1
9
1
2
7
1
1
adipose tissue
2
7
8
3
6
1
4
1
subcutaneous adipose tissue
2
2
5
1
6
1
3
1
omental fat pad
2
5
2
2
2
2
3
right lobe of liver
2
1
1
1
1
3
+ See 11 more…
in vitro differentiated cells
adipocyte
4
4
6
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
hepatocyte
2
1
1
olfactory neurosphere cell line
1
1
1
1
+ See 11 more…
cell line
HepG2
2
2
3
2
3
5
GM23248
1
2
1
1
1
1
HuH-7
1
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download