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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
76
candidate regulatory elements
75
accessible chromatin
70
target gene predictions
42
gene expression
40
chromatin state
17
eQTL
14
variant allelic effects
8
binding sites
7
histone modifications
3
Fine-mapped variants
1
differential activity
1
sQTL
Date released
113
September, 2022
63
February, 2021
March, 2023
34
May, 2021
25
February, 2024
20
January, 2021
20
November, 2021
10
June, 2020
10
March, 2020
9
May, 2020
8
August, 2021
7
August, 2018
7
January, 2020
7
January, 2022
6
October, 2019
3
August, 2017
3
March, 2024
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
254
bed bed3+
61
bigWig
38
tsv
36
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
354
Homo sapiens
Biosample type
221
tissue
91
primary cell
39
cell line
3
in vitro differentiated cells
Organ
911
epithelium
652
kidney
466
brain
453
connective tissue
375
musculature of body
311
lung
289
intestine
262
vasculature
255
heart
244
limb
230
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
314
AMP
20
ENCODE
20
T1D
Genome assembly (visualization)
304
hg19
92
GRCh38
month_released!
March, 2023
BIOSAMPLE
TYPE
354 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
differential activity
sQTL
tissue
renal pelvis
19
2
9
9
1
islet of Langerhans
6
1
11
3
12
1
2
1
1
body of pancreas
8
5
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
ovary
8
1
6
1
4
1
+ See 13 more…
primary cell
pancreatic ductal cell
6
3
2
1
1
2
pancreatic beta cell
8
3
2
1
pancreatic alpha cell
7
3
2
1
pancreatic acinar cell
6
3
2
1
pancreatic delta cell
5
4
2
1
+ See 11 more…
cell line
EndoC_BH1
8
1
8
1
1
NT2-D1 cell
1
1
1
1
2
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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