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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
77
candidate regulatory elements
50
target gene predictions
40
chromatin state
12
accessible chromatin
6
binding sites
5
histone modifications
3
eQTL
1
variant allelic effects
Date released
110
September, 2022
50
February, 2021
8
June, 2020
8
November, 2021
6
May, 2021
4
February, 2024
3
August, 2017
3
January, 2022
March, 2024
1
March, 2020
1
October, 2022
Available data
154
bed bed3+
37
bed bed9
4
bigWig
Organism
194
Homo sapiens
Biosample type
151
tissue
34
cell line
9
primary cell
Organ
947
epithelium
650
kidney
465
brain
457
connective tissue
373
musculature of body
310
lung
286
intestine
277
pancreas
265
vasculature
255
heart
243
limb
217
bodily fluid
215
embryo
206
blood
203
blood vessel
202
skin of body
172
large intestine
156
liver
146
extraembryonic component
117
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
81
uterus
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
43
spinal cord
33
spleen
25
nerve
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
186
AMP
8
ENCODE
Genome assembly (visualization)
191
hg19
50
GRCh38
month_released!
March, 2024
November, 2020
organ_slims!
mouth
BIOSAMPLE
TYPE
194 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
variant allelic effects
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
thyroid gland
8
5
4
1
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
+ See 6 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
thyroid follicular cell
1
1
1
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