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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
236
candidate regulatory elements
174
target gene predictions
134
accessible chromatin
133
chromatin state
73
gene expression
51
binding sites
38
histone modifications
30
eQTL
28
variant allelic effects
26
differential activity
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
338
September, 2022
212
February, 2021
72
November, 2021
39
February, 2024
37
September, 2023
33
June, 2020
25
May, 2021
23
March, 2020
21
January, 2020
21
May, 2020
14
February, 2020
14
October, 2022
12
August, 2017
12
August, 2021
12
January, 2022
11
March, 2023
10
May, 2024
7
November, 2022
5
April, 2020
4
February, 2023
March, 2024
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
678
bed bed3+
121
bed bed9
111
tsv
89
bigWig
10
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
944
Homo sapiens
Biosample type
415
primary cell
407
tissue
71
cell line
50
in vitro differentiated cells
1
stem cell
Organ
957
epithelium
650
kidney
468
connective tissue
465
brain
373
musculature of body
310
lung
286
intestine
277
pancreas
268
vasculature
257
heart
243
limb
217
bodily fluid
215
embryo
206
blood
203
blood vessel
202
skin of body
172
large intestine
158
liver
146
extraembryonic component
117
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
81
uterus
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
43
spinal cord
33
spleen
25
nerve
25
testis
24
lymphatic vessel
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
824
AMP
72
ENCODE
35
KPMP
5
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
825
hg19
280
GRCh38
2
hg18
month_released!
March, 2024
BIOSAMPLE
TYPE
944 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
10
1
endothelial cell of umbilical vein
6
4
2
5
2
1
osteoblast
2
2
5
1
2
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 69 more…
tissue
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
adipose tissue
7
8
2
6
3
1
4
1
sigmoid colon
10
7
1
5
coronary artery
3
3
3
3
1
2
2
3
1
+ See 31 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 17 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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