Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
88
candidate regulatory elements
78
target gene predictions
48
chromatin state
48
gene expression
31
binding sites
25
histone modifications
21
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
120
September, 2022
109
February, 2021
50
November, 2021
20
June, 2020
18
February, 2024
17
September, 2023
16
May, 2021
12
October, 2022
10
August, 2021
10
January, 2020
10
May, 2020
10
May, 2024
9
February, 2020
9
March, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
338
bed bed3+
64
tsv
55
bigWig
41
bed bed9
6
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
467
Homo sapiens
Biosample type
290
primary cell
95
tissue
50
in vitro differentiated cells
31
cell line
1
stem cell
Organ
957
epithelium
kidney
468
connective tissue
465
brain
373
musculature of body
310
lung
286
intestine
277
pancreas
268
vasculature
257
heart
243
limb
217
bodily fluid
215
embryo
206
blood
203
blood vessel
202
skin of body
172
large intestine
158
liver
146
extraembryonic component
117
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
81
uterus
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
43
spinal cord
33
spleen
25
nerve
25
testis
24
lymphatic vessel
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
391
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
395
hg19
130
GRCh38
2
hg18
month_released!
March, 2024
organ_slims!
kidney
tongue
BIOSAMPLE
TYPE
467 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
3
4
1
2
6
pericyte cell
10
3
10
1
osteoblast
5
2
2
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
+ See 43 more…
tissue
adipose tissue
2
7
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 6 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download