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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
188
accessible chromatin
113
target gene predictions
94
candidate regulatory elements
80
gene expression
44
chromatin state
40
binding sites
38
differential activity
34
variant allelic effects
27
histone modifications
2
caQTL
1
eQTL
Date released
125
November, 2021
124
September, 2022
112
February, 2021
75
February, 2024
38
March, 2023
34
May, 2021
20
January, 2021
20
September, 2023
18
June, 2020
15
November, 2022
12
February, 2023
10
May, 2024
8
May, 2020
7
April, 2020
7
August, 2021
6
August, 2018
6
January, 2020
6
March, 2020
5
October, 2019
5
October, 2022
3
August, 2017
March, 2024
2
May, 2022
1
February, 2020
1
July, 2020
1
November, 2019
Available data
499
bed bed3+
159
bigWig
104
tsv
41
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
txt
3
xls
2
bigBed bed9
Organism
661
Homo sapiens
Biosample type
542
primary cell
52
tissue
41
cell line
26
in vitro differentiated cells
Organ
957
epithelium
kidney
468
connective tissue
465
brain
373
musculature of body
310
lung
286
intestine
277
pancreas
268
vasculature
257
heart
243
limb
217
bodily fluid
215
embryo
206
blood
203
blood vessel
202
skin of body
172
large intestine
158
liver
146
extraembryonic component
117
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
81
uterus
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
43
spinal cord
33
spleen
25
nerve
25
testis
24
lymphatic vessel
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
487
AMP
125
ENCODE
20
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
542
hg19
225
GRCh38
month_released!
March, 2024
organ_slims!
kidney
tongue
BIOSAMPLE
TYPE
661 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
differential activity
variant allelic effects
histone modifications
caQTL
eQTL
primary cell
endothelial cell
15
7
3
9
2
2
1
2
1
hepatocyte
8
3
2
13
1
1
2
4
endothelial cell of umbilical vein
2
4
6
5
2
1
foreskin keratinocyte
4
11
4
pancreatic ductal cell
6
3
3
1
3
1
2
+ See 86 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
pancreatic ductal cell
2
corneal epithelium
1
+ See 7 more…
cell line
EndoC_BH1
8
1
8
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 5 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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