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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 56total RNA-seq
  • 45ATAC-seq
  • 29ChIP-seq
  • 4DNase-seq
  • 2single cell RNA-seq
Assay category
  • 58Transcription
  • 49DNA accessibility
  • 29DNA binding
Target of assay
  • 18histone
  • 18histone modification
  • 14broad histone mark
  • 7control
  • 4narrow histone mark
  • 4transcription factor
Date released
  • 66February, 2021
  • 35February, 2023
  • 26October, 2019
  • May, 2019
  • 3July, 2019
  • 2August, 2021
  • 2February, 2020
  • 2June, 2019
Available data
  • 97bam
  • 82bigWig
  • 71bed narrowPeak
  • 58tsv
  • 22bigBed narrowPeak
  • 6tagAlign
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
Organism
  • 136Homo sapiens
Biosample type
  • 68tissue
  • 66cell line
  • 2primary cell
Organ
  • 944pancreas
  • 791liver
  • 684connective tissue
  • 519epithelium
  • 491adipose tissue
  • 372heart
  • 349kidney
  • 258brain
  • 186vasculature
  • 180blood vessel
  • 159bone element
  • 136artery
  • 115limb
  • 89musculature of body
  • 69blood
  • 69bodily fluid
  • 61eye
  • 43nerve
  • 37embryo
  • 25spleen
  • 22vein
  • 20lung
  • 18ureter
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 136AMP
Genome assembly (visualization)
  • 125GRCh38
  • 90hg19
Lab
  • 136AMP-T2D consortium
month_released!
  • May, 2019
BIOSAMPLE
ASSAY

136 results

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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
tissue
coronary artery1362
tibial artery11232
pulmonary artery2
cell line
smooth muscle cell of the coronary artery5286
primary cell
endothelial cell of coronary artery1
smooth muscle cell of the coronary artery1
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