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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
78
candidate regulatory elements
48
target gene predictions
40
chromatin state
12
accessible chromatin
9
binding sites
6
histone modifications
4
eQTL
3
gene expression
Date released
110
September, 2022
54
February, 2021
9
June, 2020
6
November, 2021
5
May, 2021
4
January, 2022
3
August, 2017
3
February, 2024
3
March, 2024
2
October, 2022
1
March, 2020
Available data
156
bed bed3+
37
bed bed9
3
bigWig
3
tsv
Organism
200
Homo sapiens
Biosample type
152
tissue
41
cell line
7
primary cell
Organ
959
epithelium
651
kidney
468
connective tissue
462
brain
373
musculature of body
311
lung
289
intestine
277
pancreas
268
vasculature
256
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
203
blood vessel
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
74
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
194
AMP
6
ENCODE
Genome assembly (visualization)
193
hg19
49
GRCh38
month_released!
May, 2019
organ_slims!
adipose tissue
BIOSAMPLE
TYPE
200 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
testis
7
3
3
1
1
1
1
1
colonic mucosa
4
2
3
1
+ See 8 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
NT2-D1 cell
1
1
1
1
2
HCT-116 cell
1
1
2
+ See 5 more…
primary cell
colon epithelial cell
3
3
Leydig cell
1
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