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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ChIP-seq
Assay category
72
DNA binding
Target of assay
150
histone
150
histone modification
78
broad histone mark
72
narrow histone mark
52
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
34
August, 2017
15
September, 2018
11
October, 2018
4
November, 2019
3
March, 2020
3
October, 2019
2
May, 2021
May, 2019
Available data
68
bigWig
66
bam
58
bed narrowPeak
48
fastq
18
bigBed narrowPeak
7
tagAlign
6
bed bed3+
4
bed broadPeak
Organism
70
Homo sapiens
Biosample type
31
primary cell
31
tissue
9
cell line
1
in vitro differentiated cells
Organ
107
brain
72
pancreas
60
liver
48
epithelium
34
heart
33
connective tissue
14
kidney
limb
12
adipose tissue
12
vasculature
11
blood vessel
11
musculature of body
8
embryo
8
nerve
6
vein
4
artery
4
gonad
4
ovary
3
eye
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
68
AMP
4
T1D
Genome assembly (visualization)
68
hg19
66
GRCh38
Lab
72
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
26
missing controlled_by
Audit category:
6
inconsistent control read length
month_released!
May, 2019
organ_slims!
limb
spleen
BIOSAMPLE
ASSAY
72 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
12
pancreatic ductal cell
7
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
tissue
islet of Langerhans
16
endocrine pancreas
6
body of pancreas
5
pancreas
4
cell line
EndoC_BH1
6
Panc1
3
in vitro differentiated cells
pancreatic PP cell
1
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