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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
55
accessible chromatin
37
target gene predictions
33
differential activity
30
gene expression
24
candidate regulatory elements
17
chromatin state
15
eQTL
7
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
47
March, 2023
44
September, 2022
May, 2021
31
February, 2021
25
February, 2024
20
January, 2021
18
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
138
bed bed3+
60
tsv
55
bigWig
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
238
Homo sapiens
Biosample type
114
primary cell
104
tissue
17
cell line
3
in vitro differentiated cells
Organ
910
epithelium
633
kidney
442
connective tissue
436
brain
364
musculature of body
307
lung
283
intestine
251
vasculature
242
heart
238
pancreas
231
limb
214
bodily fluid
208
embryo
203
blood
199
skin of body
190
blood vessel
169
large intestine
152
liver
143
extraembryonic component
117
stomach
107
eye
88
bone element
85
mammary gland
adipose tissue
83
small intestine
81
uterus
76
prostate gland
72
placenta
71
adrenal gland
68
artery
63
penis
61
lymph node
61
ureter
49
gonad
47
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
22
nerve
22
ovary
22
thyroid gland
20
vein
19
mouth
18
skeleton
16
bronchus
12
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
198
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
165
hg19
59
GRCh38
month_released!
May, 2020
May, 2021
organ_slims!
adipose tissue
BIOSAMPLE
TYPE
238 results
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Clear Filters
accessible chromatin
target gene predictions
differential activity
gene expression
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
primary cell
pancreatic beta cell
8
3
3
2
1
pancreatic ductal cell
6
2
3
2
1
2
1
pancreatic alpha cell
7
3
3
2
1
pancreatic delta cell
5
4
3
2
1
pancreatic acinar cell
6
2
3
2
1
+ See 10 more…
tissue
islet of Langerhans
3
1
9
3
13
1
2
2
2
2
body of pancreas
4
2
8
4
1
3
pancreas
5
4
5
3
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
1
1
3
Panc1
1
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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