Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
84
candidate regulatory elements
78
target gene predictions
47
chromatin state
46
binding sites
25
histone modifications
13
accessible chromatin
3
eQTL
1
gene expression
1
pQTL
Date released
132
September, 2022
92
February, 2021
28
February, 2024
19
October, 2022
13
June, 2020
5
May, 2021
November, 2021
3
August, 2017
3
August, 2021
1
January, 2022
1
March, 2020
1
March, 2024
Available data
250
bed bed3+
44
bed bed9
1
tsv
Organism
298
Homo sapiens
Biosample type
205
cell line
84
tissue
9
primary cell
Organ
807
epithelium
630
kidney
447
brain
400
connective tissue
359
musculature of body
302
lung
270
intestine
253
pancreas
245
vasculature
234
heart
234
limb
218
bodily fluid
213
embryo
207
blood
194
skin of body
190
blood vessel
168
large intestine
148
liver
143
extraembryonic component
110
stomach
103
eye
87
bone element
86
adipose tissue
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
63
adrenal gland
62
lymph node
61
ureter
48
gonad
47
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
298
AMP
Genome assembly (visualization)
296
hg19
73
GRCh38
month_released!
May, 2020
November, 2021
organ_slims!
lymphoid tissue
BIOSAMPLE
TYPE
298 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
pQTL
cell line
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 26 more…
tissue
small intestine
29
17
15
1
1
duodenal mucosa
4
2
3
muscle layer of duodenum
4
2
2
blood
2
cerebrospinal fluid
1
+ See 1 more…
primary cell
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
See all biosamples
Download