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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
946
histone modifications
839
accessible chromatin
810
candidate regulatory elements
771
binding sites
682
gene expression
471
target gene predictions
169
eQTL
167
differential activity
106
chromatin state
74
Fine-mapped variants
61
variant allelic effects
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Date released
2509
February, 2021
September, 2022
384
May, 2021
350
February, 2024
332
November, 2021
286
September, 2023
276
June, 2020
May, 2020
127
March, 2020
126
August, 2021
106
January, 2022
89
January, 2020
82
October, 2022
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
33
August, 2017
32
February, 2023
29
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3960
bed bed3+
899
tsv
488
bigWig
108
txt
37
bigBed bed9
34
bed bed9+
33
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
5130
Homo sapiens
Biosample type
1888
primary cell
1682
cell line
1198
tissue
358
in vitro differentiated cells
4
stem cell
Organ
783
epithelium
408
kidney
330
connective tissue
267
brain
227
pancreas
176
vasculature
166
musculature of body
143
bodily fluid
blood
136
heart
134
embryo
133
blood vessel
125
intestine
107
liver
102
skin of body
101
lung
96
limb
80
eye
76
large intestine
71
uterus
62
adipose tissue
50
stomach
49
artery
47
extraembryonic component
46
bone element
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
24
esophagus
22
ureter
19
spinal cord
16
spleen
15
lymphatic vessel
thymus
15
vein
14
testis
13
nerve
13
pituitary gland
11
ovary
11
thyroid gland
10
bronchus
9
bone marrow
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4424
AMP
332
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4163
hg19
992
GRCh38
4
hg18
month_released!
May, 2020
September, 2022
organ_slims!
blood
thymus
BIOSAMPLE
TYPE
5132 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
eQTL
differential activity
chromatin state
Fine-mapped variants
variant allelic effects
caQTL
hQTL
sQTL
variant to gene
meQTL
pQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
86
16
1
15
1
4
2
1
1
CD8-positive, alpha-beta T cell
30
2
7
3
4
1
endothelial cell
1
15
2
9
7
1
2
2
fibroblast
16
1
4
2
6
hepatocyte
4
8
1
13
2
1
+ See 433 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
EndoC_BH1
1
8
1
8
1
3
breast cancer cell
11
9
HFFc6
19
+ See 720 more…
tissue
islet of Langerhans
1
3
2
11
1
13
3
2
2
2
kidney
2
10
15
1
7
1
2
heart
1
5
18
1
3
1
1
retina
1
23
3
1
1
1
stomach
1
3
21
1
2
1
+ See 250 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
4
2
1
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 117 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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