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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
167
candidate regulatory elements
155
accessible chromatin
127
target gene predictions
94
chromatin state
51
gene expression
40
binding sites
33
histone modifications
25
eQTL
14
differential activity
9
Fine-mapped variants
7
variant allelic effects
2
caQTL
2
pQTL
Date released
258
September, 2022
164
February, 2021
57
November, 2021
31
June, 2020
29
November, 2022
25
February, 2023
20
May, 2021
19
February, 2024
17
September, 2023
15
October, 2022
13
January, 2020
12
February, 2020
12
March, 2020
May, 2020
11
August, 2021
8
January, 2022
7
August, 2017
7
March, 2023
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
Available data
542
bed bed3+
94
bigWig
87
bed bed9
72
tsv
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
726
Homo sapiens
Biosample type
325
primary cell
295
tissue
59
in vitro differentiated cells
46
cell line
1
stem cell
Organ
934
epithelium
633
kidney
450
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
251
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
643
AMP
57
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
649
hg19
184
GRCh38
2
hg18
month_released!
May, 2020
BIOSAMPLE
TYPE
726 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
1
10
10
1
trophoblast cell
7
1
5
4
1
osteoblast
2
5
2
1
2
3
2
fibroblast of lung
6
4
4
2
+ See 55 more…
tissue
placenta
26
1
15
14
1
2
1
retina
6
23
3
3
1
1
1
1
adipose tissue
7
2
8
6
3
1
4
spinal cord
14
1
8
7
1
pigmented layer of retina
20
+ See 17 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
3
1
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
trophoblast cell
2
2
1
+ See 8 more…
cell line
WERI-Rb-1
2
1
1
1
2
1
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
HTR-8/Svneo
1
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
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