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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
264
gene expression
246
candidate regulatory elements
237
accessible chromatin
202
target gene predictions
127
chromatin state
93
differential activity
48
binding sites
33
histone modifications
29
variant allelic effects
10
eQTL
6
Fine-mapped variants
4
caQTL
Date released
355
September, 2022
284
February, 2021
155
September, 2023
138
November, 2021
91
February, 2024
40
May, 2021
38
March, 2023
30
June, 2020
24
August, 2021
20
January, 2021
May, 2020
19
January, 2020
15
February, 2020
15
March, 2020
15
November, 2022
12
February, 2023
9
October, 2022
7
April, 2020
6
August, 2017
6
August, 2018
6
October, 2019
5
May, 2022
4
March, 2024
2
May, 2019
1
January, 2022
1
July, 2020
1
November, 2019
Available data
806
bed bed3+
338
tsv
191
bigWig
121
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1299
Homo sapiens
Biosample type
850
primary cell
363
tissue
58
cell line
28
in vitro differentiated cells
Organ
934
epithelium
633
kidney
450
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
251
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
trachea
4
nose
1
pericardium
Project
977
AMP
155
KPMP
138
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
945
hg19
329
GRCh38
month_released!
May, 2020
organ_slims!
thymus
trachea
BIOSAMPLE
TYPE
1299 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
1
8
3
1
1
4
1
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
foreskin keratinocyte
11
4
4
+ See 151 more…
tissue
muscle of arm
33
1
16
16
muscle of leg
27
2
14
15
muscle of back
28
13
13
pigmented layer of retina
20
psoas muscle
7
1
8
4
+ See 37 more…
cell line
EndoC_BH1
8
8
1
3
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
keratinocyte
3
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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