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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
264
gene expression
218
accessible chromatin
133
target gene predictions
121
candidate regulatory elements
97
differential activity
68
chromatin state
46
binding sites
30
histone modifications
29
variant allelic effects
7
eQTL
6
Fine-mapped variants
3
caQTL
Date released
212
February, 2021
184
September, 2022
165
September, 2023
122
November, 2021
79
February, 2024
38
March, 2023
34
May, 2021
27
June, 2020
24
August, 2021
23
January, 2020
May, 2020
20
January, 2021
15
November, 2022
14
March, 2020
13
February, 2023
10
February, 2020
8
October, 2022
7
April, 2020
7
October, 2019
6
August, 2018
3
August, 2017
3
March, 2024
3
November, 2019
2
January, 2022
2
May, 2022
1
July, 2020
Available data
582
bed bed3+
349
tsv
180
bigWig
80
txt
65
bed bed9
14
bigBed narrowPeak
6
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1022
Homo sapiens
Biosample type
836
primary cell
119
tissue
41
cell line
26
in vitro differentiated cells
Organ
934
epithelium
633
kidney
450
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
251
vasculature
heart
234
limb
218
bodily fluid
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
706
AMP
165
KPMP
122
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
657
hg19
262
GRCh38
month_released!
May, 2020
organ_slims!
embryo
heart
BIOSAMPLE
TYPE
1022 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
8
3
1
1
1
4
1
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
foreskin keratinocyte
4
11
4
+ See 149 more…
tissue
pigmented layer of retina
20
tibial artery
1
3
2
3
2
2
3
ascending aorta
1
1
2
4
3
1
3
aorta
1
4
4
4
breast epithelium
1
3
5
2
+ See 23 more…
cell line
EndoC_BH1
8
8
1
3
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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