Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 202gene expression
  • 159candidate regulatory elements
  • 77chromatin state
  • 75target gene predictions
  • 56differential activity
  • 47accessible chromatin
  • 7binding sites
  • 6histone modifications
  • 4eQTL
Date released
  • 225September, 2022
  • 188February, 2021
  • 140September, 2023
  • 28August, 2021
  • May, 2020
  • 15June, 2020
  • 14January, 2020
  • 9February, 2020
  • 3March, 2020
  • 3November, 2021
  • 2March, 2024
  • 2October, 2022
  • 1April, 2019
  • 1February, 2024
  • 1January, 2022
  • 1May, 2019
Available data
  • 297bed bed3+
  • 251tsv
  • 87txt
  • 77bed bed9
  • 33bigWig
  • 2bigBed bed9
Organism
  • 633Homo sapiens
Collection Tags
  • 225EpiMap
  • 140KPMP
  • 127DGA
  • 91ENCODE
  • 26ChIP-Atlas
  • 3AMP
  • 3T2DKP
  • 2GTEx
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 303primary cell
  • 289tissue
  • 40cell line
  • 1in vitro differentiated cells
Organ
  • 2898vasculature
  • 2859bodily fluid
  • 2848blood
  • 2837blood vessel
  • 2656vein
  • 943epithelium
  • 633kidney
  • 470connective tissue
  • 448brain
  • 375musculature of body
  • 311lung
  • 289intestine
  • 271pancreas
  • 246heart
  • 234limb
  • 215embryo
  • 204skin of body
  • 174large intestine
  • 160liver
  • 146extraembryonic component
  • 119stomach
  • 107eye
  • 96adipose tissue
  • 88bone element
  • 87mammary gland
  • 84small intestine
  • 83uterus
  • 78prostate gland
  • 74artery
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 62lymph node
  • 61ureter
  • 50gonad
  • 48thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 22nerve
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13breast
  • 13pituitary gland
  • 12bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 490AMP
  • 140KPMP
  • 3ENCODE
Genome assembly (visualization)
  • 373hg19
  • 102GRCh38
month_released!
  • May, 2020
BIOSAMPLE
TYPE

633 results

search-icontable-tab-icon
Clear Filters
gene expression
candidate regulatory elements
chromatin state
target gene predictions
differential activity
accessible chromatin
binding sites
histone modifications
eQTL
primary cell
epithelial cell of proximal tubule1621111
glomerular endothelial cell142112
glomerular visceral epithelial cell52112
kidney tubule cell13222
kidney glomerular epithelial cell12112
tissue
kidney729161410121
right kidney201010
renal cortex interstitium20991
renal pelvis19992
left kidney1899
cell line
HEK293311121
ACHN2111
Caki22111
RCC 78602111
G401211
in vitro differentiated cells
renal cell carcinoma1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego