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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
169
candidate regulatory elements
111
target gene predictions
98
chromatin state
68
accessible chromatin
58
gene expression
42
binding sites
34
histone modifications
19
differential activity
17
eQTL
12
Fine-mapped variants
4
caQTL
4
variant allelic effects
Date released
258
September, 2022
150
February, 2021
36
February, 2024
35
September, 2023
23
June, 2020
23
March, 2020
19
January, 2020
May, 2020
15
November, 2021
13
May, 2021
11
August, 2021
7
August, 2017
7
February, 2020
7
January, 2022
6
October, 2022
4
February, 2023
4
March, 2023
4
March, 2024
4
November, 2019
3
April, 2020
2
May, 2022
2
October, 2019
1
July, 2020
1
May, 2019
1
September, 2018
Available data
438
bed bed3+
91
bed bed9
87
tsv
50
bigWig
8
bigBed bed9
3
csv
2
txt
1
bam
Organism
636
Homo sapiens
Biosample type
284
tissue
217
primary cell
126
cell line
9
in vitro differentiated cells
Organ
934
epithelium
633
kidney
450
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
251
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
583
AMP
35
KPMP
15
ENCODE
3
LungMap
Genome assembly (visualization)
547
hg19
186
GRCh38
2
hg18
month_released!
May, 2020
BIOSAMPLE
TYPE
636 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
differential activity
eQTL
Fine-mapped variants
caQTL
variant allelic effects
tissue
large intestine
27
14
13
1
1
liver
13
10
9
4
1
1
2
1
7
1
sigmoid colon
10
7
5
1
coronary artery
3
3
3
3
1
2
3
1
transverse colon
8
5
4
1
1
+ See 20 more…
primary cell
hepatocyte
1
3
1
8
13
1
4
1
endothelial cell of umbilical vein
6
4
5
1
2
endothelial cell of hepatic sinusoid
6
4
6
dermis blood vessel endothelial cell
6
2
2
epithelial cell of prostate
4
3
2
+ See 31 more…
cell line
HepG2
2
3
2
2
3
5
22Rv1
4
2
2
1
1
HT-29
2
2
1
1
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
+ See 21 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
dermis microvascular lymphatic vessel endothelial cell
1
1
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