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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
79
candidate regulatory elements
50
target gene predictions
42
chromatin state
21
accessible chromatin
6
binding sites
5
histone modifications
4
eQTL
4
gene expression
3
Fine-mapped variants
Date released
116
September, 2022
58
February, 2021
8
June, 2020
6
November, 2021
5
May, 2021
4
March, 2020
3
August, 2017
3
February, 2020
3
February, 2024
3
January, 2022
May, 2020
2
March, 2024
1
January, 2020
1
November, 2019
1
October, 2022
Available data
164
bed bed3+
39
bed bed9
13
bigWig
8
tsv
Organism
214
Homo sapiens
Biosample type
174
tissue
34
cell line
6
primary cell
Organ
944
epithelium
633
kidney
458
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
254
vasculature
246
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
208
AMP
6
ENCODE
Genome assembly (visualization)
207
hg19
64
GRCh38
month_released!
May, 2020
BIOSAMPLE
TYPE
214 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
Fine-mapped variants
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
tibial nerve
6
3
3
3
2
2
3
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
+ See 19 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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