Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 50target gene predictions
  • 38accessible chromatin
  • 35candidate regulatory elements
  • 33differential activity
  • 24gene expression
  • 17chromatin state
  • 14histone modifications
  • 13binding sites
  • 8eQTL
  • 3Fine-mapped variants
  • 1caQTL
  • 1variant allelic effects
Date released
  • 46September, 2022
  • 43July, 2026
  • 30May, 2026
  • 28February, 2024
  • 26February, 2021
  • 12May, 2024
  • 10August, 2021
  • 10March, 2020
  • 5June, 2020
  • 5November, 2021
  • 4March, 2023
  • 3August, 2017
  • 3January, 2020
  • May, 2020
  • 3May, 2021
  • 2February, 2020
  • 2May, 2022
  • 1January, 2022
  • 1July, 2020
  • 1November, 2019
  • 1October, 2022
  • 1September, 2018
Available data
  • 159bed bed3+
  • 27tsv
  • 23bigWig
  • 14bed bed9
  • 3csv
  • 1bam
  • 1bigBed bed9
Organism
  • 237Homo sapiens
Collection Tags
  • 44DGA
  • 42EpiMap
  • 34AMP
  • 30pyxis
  • 28HDMA
  • 18T2DKP
  • 17ChIP-Atlas
  • 15ENCODE-rE2G
  • 14 T2DKP
  • 12FNIH_projects-liver
  • 11ENCODE
  • 5GTEx
  • 4HPAP
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 132primary cell
  • 65tissue
  • 32cell line
  • 8in vitro differentiated cells
Organ
  • 3365blood
  • 2887vasculature
  • 2853bodily fluid
  • 2850blood vessel
  • 2657vein
  • 937epithelium
  • 884brain
  • 737kidney
  • 508connective tissue
  • 477heart
  • 440lung
  • 381musculature of body
  • 358intestine
  • 313pancreas
  • 296skin of body
  • 237liver
  • 234limb
  • 226large intestine
  • 215embryo
  • 174extraembryonic component
  • 159eye
  • 140stomach
  • 139adipose tissue
  • 111muscle organ
  • 105bone element
  • 104mammary gland
  • 102adrenal gland
  • 97placenta
  • 97small intestine
  • 93uterus
  • 92thymus
  • 87prostate gland
  • 83artery
  • 70ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 24lymphoid tissue
  • 24skeleton
  • 22nerve
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13pituitary gland
  • 13urinary bladder
  • 12bone marrow
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 232AMP
  • 5ENCODE
Genome assembly (visualization)
  • 134hg19
  • 115GRCh38
  • 2hg18
month_released!
  • May, 2020
BIOSAMPLE
TYPE

237 results

search-icontable-tab-icon
Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
differential activity
gene expression
chromatin state
histone modifications
binding sites
eQTL
Fine-mapped variants
caQTL
variant allelic effects
primary cell
hepatocyte81224131411
endothelial cell of hepatic sinusoid646
hepatic stellate cell3424111
endothelial cell1114
cholangiocyte114
tissue
liver12413192171
right lobe of liver621113
left lobe of liver1
cell line
HepG2522253
HuH-7211111
HuH-7.5211
hepatic stellate cell11
in vitro differentiated cells
hepatocyte221
hepatocyte(AFP)3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego