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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1339target gene predictions
  • 941chromatin state
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 93binding sites
  • 84Fine-mapped variants
  • 62variant allelic effects
  • 20accessible chromatin
  • 13caQTL
  • 7sQTL
  • 4variant to gene
  • 3meQTL
  • 1other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2499September, 2022
  • 1021February, 2021
  • 324February, 2024
  • 286September, 2023
  • 243May, 2021
  • May, 2020
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101October, 2022
  • 81August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 19April, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 3576tsv
  • 3416bed bed3+
  • 866bed bed9
  • 108txt
  • 37bigBed bed9
  • 37bigWig
  • 34bed bed9+
  • 26csv
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 7965Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 958ENCODE
  • 486DGA
  • 281KPMP
  • 261AMP
  • 235T1D
  • 1744DN
  • 151GTEx
  • 148T2DKP
  • 138 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 81BLUEPRINT
  • 55HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
Biosample type
  • 4949tissue
  • 1721primary cell
  • 1029cell line
  • 262in vitro differentiated cells
  • 4stem cell
Organ
  • 2841vasculature
  • 2795bodily fluid
  • 2794blood vessel
  • 2786blood
  • 2652vein
  • 673epithelium
  • 575kidney
  • 350brain
  • 340connective tissue
  • 335musculature of body
  • 290lung
  • 255intestine
  • 210limb
  • 209heart
  • 198pancreas
  • 180embryo
  • 164skin of body
  • 154large intestine
  • 130extraembryonic component
  • 111liver
  • 110stomach
  • 86adipose tissue
  • 81small intestine
  • 75uterus
  • 66adrenal gland
  • 66mammary gland
  • 64placenta
  • 60bone element
  • 58prostate gland
  • 57ureter
  • 53artery
  • 51penis
  • 44thymus
  • 42gonad
  • 41esophagus
  • 40eye
  • 40lymph node
  • 40spinal cord
  • 31spleen
  • 21lymphoid tissue
  • 21ovary
  • 21testis
  • 21thyroid gland
  • 19nerve
  • 18lymphatic vessel
  • 18mouth
  • 12breast
  • 12pituitary gland
  • 11bronchus
  • 10skeleton
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 6bone marrow
  • 3nose
  • 1pericardium
Project
  • 7506AMP
  • 281KPMP
  • 111ENCODE
  • 32T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4327hg19
  • 1404GRCh38
  • 4hg18
month_released!
  • May, 2020
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

7967 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
gene expression
eQTL
differential activity
binding sites
Fine-mapped variants
variant allelic effects
accessible chromatin
caQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
stomach40211911
heart3720203
lung33171611
kidney29141671
primary cell
common myeloid progenitor, CD34-positive271413
B cell179821
CD4-positive, alpha-beta memory T cell1499
CD14-positive monocyte8194
endothelial cell379122
cell line
HeLa-S355531
A5492119181
H1-hESC139181
K56272371
MCF-79651
in vitro differentiated cells
hematopoietic multipotent progenitor cell1910101
neural progenitor cell5547
adipocyte4661
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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