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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • 977histone modifications
  • 941chromatin state
  • 876candidate regulatory elements
  • 859accessible chromatin
  • 817binding sites
  • 506target gene predictions
  • 186eQTL
  • 130differential activity
  • 84Fine-mapped variants
  • 62variant allelic effects
  • 15gene expression
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2413February, 2021
  • 846September, 2022
  • 333November, 2021
  • 312February, 2024
  • 299May, 2021
  • 289June, 2020
  • May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 101October, 2022
  • 75August, 2021
  • 72January, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 26February, 2020
  • 19April, 2020
  • 15March, 2023
  • 14November, 2019
  • 14October, 2019
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 4279bed bed3+
  • 2903tsv
  • 866bed bed9
  • 493bigWig
  • 37bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 8125Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 936ENCODE
  • 833EpiMap
  • 424AMP
  • 402T2DKP
  • 351DGA
  • 310T1D
  • 1744DN
  • 164BLUEPRINT
  • 127 T2DKP
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 4231tissue
  • 1971cell line
  • 1600primary cell
  • 319in vitro differentiated cells
  • 4stem cell
Organ
  • 2815vasculature
  • 2807bodily fluid
  • 2801blood
  • 2775blood vessel
  • 2651vein
  • 576epithelium
  • 335connective tissue
  • 309brain
  • 281kidney
  • 228musculature of body
  • 176intestine
  • 170lung
  • 165pancreas
  • 153heart
  • 151embryo
  • 137limb
  • 134skin of body
  • 113liver
  • 106large intestine
  • 88eye
  • 80extraembryonic component
  • 73uterus
  • 71stomach
  • 67adipose tissue
  • 59mammary gland
  • 56bone element
  • 54artery
  • 51prostate gland
  • 46lymph node
  • 46small intestine
  • 44adrenal gland
  • 44penis
  • 41placenta
  • 35ureter
  • 32gonad
  • 29esophagus
  • 26spinal cord
  • 26thymus
  • 21spleen
  • 17lymphatic vessel
  • 17testis
  • 14nerve
  • 14ovary
  • 14thyroid gland
  • 13lymphoid tissue
  • 12bronchus
  • 12pituitary gland
  • 12skeleton
  • 10bone marrow
  • 10mouth
  • 8breast
  • 5tongue
  • 5trachea
  • 5urinary bladder
  • 5vagina
  • 2nose
Project
  • 7587AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5182hg19
  • 1898GRCh38
  • 4hg18
month_released!
  • May, 2020
software_used.software.name!
  • r
BIOSAMPLE
TYPE

8127 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
chromatin state
candidate regulatory elements
accessible chromatin
binding sites
target gene predictions
eQTL
differential activity
Fine-mapped variants
variant allelic effects
gene expression
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
stomach11921321
heart12018511
kidney216151011
brain31813212
cell line
HeLa-S332152
H1-hESC111238
K5621711217
A5491183121
breast cancer cell119
primary cell
monocyte8616114121
CD8-positive, alpha-beta T cell301724
endothelial cell131527122
fibroblast3161426
macrophage31229131
in vitro differentiated cells
neural progenitor cell1541101
hematopoietic multipotent progenitor cell110911
adipocyte162414
embryonic stem cell15611
T-cell acute lymphoblastic leukemia53
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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