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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
235
gene expression
126
accessible chromatin
92
candidate regulatory elements
92
differential activity
60
target gene predictions
50
chromatin state
43
binding sites
39
variant allelic effects
28
histone modifications
3
eQTL
2
caQTL
Date released
191
February, 2021
155
September, 2023
142
September, 2022
November, 2021
74
February, 2024
38
March, 2023
May, 2021
24
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
May, 2022
1
July, 2020
1
March, 2024
1
November, 2019
Available data
389
bed bed3+
306
tsv
98
bigWig
78
txt
47
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
770
Homo sapiens
Biosample type
670
primary cell
48
tissue
28
cell line
24
in vitro differentiated cells
Organ
788
epithelium
649
kidney
455
brain
394
connective tissue
358
musculature of body
298
lung
264
intestine
257
vasculature
241
heart
241
limb
226
pancreas
214
bodily fluid
206
embryo
203
blood
198
blood vessel
189
skin of body
163
large intestine
148
liver
140
extraembryonic component
108
stomach
105
eye
88
bone element
86
adipose tissue
79
mammary gland
79
small intestine
79
uterus
76
prostate gland
73
artery
70
placenta
64
ureter
63
penis
61
adrenal gland
61
lymph node
47
gonad
47
thymus
42
spinal cord
esophagus
33
spleen
26
testis
nerve
24
lymphoid tissue
22
vein
20
ovary
20
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
12
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
586
AMP
155
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
439
hg19
104
GRCh38
month_released!
May, 2021
November, 2021
organ_slims!
esophagus
nerve
BIOSAMPLE
TYPE
770 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
hepatocyte
13
7
1
1
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
endothelial cell
8
5
1
2
2
1
1
2
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
3
5
2
1
+ See 119 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
2
2
kidney epithelium
1
1
pancreatic ductal cell
2
breast - mammary tissue
1
+ See 13 more…
cell line
EndoC_BH1
1
3
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 2 more…
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