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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
238
gene expression
209
accessible chromatin
100
candidate regulatory elements
92
differential activity
66
target gene predictions
55
binding sites
41
variant allelic effects
36
histone modifications
8
chromatin state
5
eQTL
2
caQTL
Date released
September, 2022
261
February, 2021
155
September, 2023
127
November, 2021
79
February, 2024
May, 2021
38
March, 2023
34
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
9
October, 2022
7
April, 2020
7
March, 2020
6
August, 2017
6
August, 2018
5
October, 2019
4
March, 2024
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
511
bed bed3+
309
tsv
173
bigWig
78
txt
13
bigBed narrowPeak
6
csv
2
bed bed9
2
bigBed bed9
Organism
852
Homo sapiens
Biosample type
685
primary cell
95
tissue
48
cell line
24
in vitro differentiated cells
Organ
764
epithelium
427
kidney
324
connective tissue
275
brain
200
pancreas
188
vasculature
165
musculature of body
143
heart
141
blood vessel
139
bodily fluid
134
blood
127
embryo
119
intestine
107
liver
103
limb
97
lung
97
skin of body
82
eye
71
large intestine
69
uterus
62
adipose tissue
52
artery
48
stomach
47
bone element
44
extraembryonic component
43
mammary gland
37
lymph node
37
prostate gland
33
penis
29
adrenal gland
26
small intestine
25
gonad
25
ureter
24
esophagus
24
placenta
18
spinal cord
16
nerve
16
vein
15
lymphatic vessel
15
spleen
15
thymus
14
testis
10
bone marrow
10
bronchus
10
ovary
10
thyroid gland
9
lymphoid tissue
9
skeleton
7
mouth
6
breast
5
trachea
4
tongue
4
urinary bladder
4
vagina
3
pituitary gland
1
nose
1
pericardium
Project
541
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
516
hg19
189
GRCh38
month_released!
May, 2021
September, 2022
BIOSAMPLE
TYPE
852 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
target gene predictions
binding sites
variant allelic effects
histone modifications
chromatin state
eQTL
caQTL
primary cell
endothelial cell
8
15
7
2
2
1
1
2
hepatocyte
13
8
1
1
2
4
epithelial cell of proximal tubule
16
1
1
1
1
glomerular endothelial cell
14
2
1
1
pancreatic ductal cell
2
6
3
2
1
1
2
+ See 145 more…
tissue
pigmented layer of retina
20
large intestine
1
15
1
sigmoid colon
1
5
1
transverse colon
1
4
1
esophagus squamous epithelium
1
4
+ See 28 more…
cell line
EndoC_BH1
1
3
1
1
HT-29
1
1
1
1
RKO
1
1
1
1
SW480
1
1
1
1
keratinocyte
3
1
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
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